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Quantum-Si Inc.: Q2 FY2026 earnings call

What management said about Q2 FY2026, from the documents filed with the SEC on 13 August 2026: press release. Guidance figures: 1 raised, 2 new, 3 kept. The quarter’s numbers.

Key takeaways

  • Quarterly revenue fell year over year: Second quarter revenue was $344 thousand, against $591 thousand in the second quarter of 2025. Management tied the decline to the transition to Proteus. Source
  • Proteus launch moved to Q2 2027: The added design cycle focuses on manufacturing readiness, repeatability and launch customer experience. The prior release had pointed to a launch at the end of 2026. Source
  • Lower instrument sales and migration programs: Management cited lower instrument demand, continued consumable use by existing customers, and commercial programs supporting customer migration to Proteus as drivers of lower revenue. Source
  • Workforce cut about 20%: The reduction in force covers about 20% of total company headcount and is aligned to the revised Proteus launch timeline. Source
  • Cash and investments declined: Cash, cash equivalents and marketable securities were $169.9 million at June 30, down from $190.4 million at March 31. Source
  • Runway extended into Q4 2028: Management linked the extended funding period to the updated operating plan, including the workforce reduction and other cost-management actions. Source
  • Customer work widens non-human markets: Management said recent customer work covered agricultural, pathogen detection and typing, and viral protein surveillance applications of protein sequencing. Source

“Our conviction in Proteus remains strong. Testing of our integrated instruments has generated sequencing data that reinforces our confidence in the underlying technology,”

Jeff Hawkins, president and Chief Executive Officer of Quantum-Si

Guidance

AreaPeriodFigureAgainst last quarter
Full-year revenue SourceFull year 2026Approximately $1.0 millionKept
Adjusted total operating expenses SourceFull year 2026$98.0 million or lessKept
Total cash usage SourceFull year 2026$93.0 million or lessKept
Proteus commercial launch timing SourceAnticipated launchQ2 2027
Cash runway SourceOperating planInto the fourth quarter of 2028Raised from Into the second quarter of 2028
Annualized operating expense savings SourceOnce fully implementedApproximately $12 millionNew
Non-human proteomics market estimate SourceAnnual marketMore than $4 billion annuallyNew

What changed from last quarter

  • Guidance kept: Full-year 2026 revenue, adjusted total operating expenses and total cash usage guidance were reiterated at the levels first issued on March 3, 2026. Source
  • Guidance lowered: Anticipated Proteus commercial launch moved from the end of 2026 to Q2 2027, to add an integrated instrument design cycle. Source
  • Guidance raised: Cash runway extended to the fourth quarter of 2028 from the second quarter of 2028, based on the updated operating plan. Source
  • New: A reduction in force affecting about 20% of total company headcount was announced, aligned to the updated Proteus launch timeline. Source
  • New: Management identified non-human markets for Proteus, including agricultural, pathogen detection and typing, and viral protein surveillance applications, through recent customer work. Source

Results and revenue

  • Quarterly revenue fell year over year: Second quarter revenue was $344 thousand, against $591 thousand in the second quarter of 2025. Management tied the decline to the transition to Proteus. Source
  • Six-month revenue well below prior year: Revenue for the six months ended June 30, 2026 was $602 thousand, compared with $1.4 million in the prior-year period. Source
  • Net loss narrowed from prior year: The company reported a second quarter net loss of $23.5 million, compared with a net loss of $28.8 million in the year-earlier quarter. Source
  • Adjusted EBITDA loss narrowed: Adjusted EBITDA was a loss of $21.2 million for the quarter, compared with a loss of $22.2 million a year earlier, per the non-GAAP reconciliation. Source

Platinum to Proteus transition

  • Proteus launch moved to Q2 2027: The added design cycle focuses on manufacturing readiness, repeatability and launch customer experience. The prior release had pointed to a launch at the end of 2026. Source
  • Lower instrument sales and migration programs: Management cited lower instrument demand, continued consumable use by existing customers, and commercial programs supporting customer migration to Proteus as drivers of lower revenue. Source
  • 2026 revenue tied to customer planning: Management expects 2026 revenue to reflect customer purchasing behavior, installed-base consumable activity and customer planning for the new platform. Source

“we concluded that adding an additional integrated instrument design cycle was the most responsible path to strengthen manufacturing readiness, improve system performance, and ensure a successful customer experience at launch.”

Jeff Hawkins, president and Chief Executive Officer of Quantum-Si

Margins and operating costs

  • Second quarter gross margin 50%: Gross profit was $172 thousand in the quarter, against $351 thousand a year earlier. Source
  • Six-month gross margin 41%: Management said six-month gross margin reflected revenue mix, timing of sales and transition-period commercial activity. Source
  • Quarterly operating expenses fell: Total operating expenses were $25.8 million, compared with $30.5 million a year earlier. Adjusted total operating expenses were $22.6 million, against $23.8 million. Source
  • Spending supports Proteus work: Management said spending reflected continued investment in Proteus development and commercialization readiness, partly offset by ongoing expense management. Source
  • Six-month operating expenses lower: Six-month total operating expenses were lower than the prior year, with adjusted total operating expenses of $43.9 million against $46.6 million. Source

Cost actions and workforce

  • Workforce cut about 20%: The reduction in force covers about 20% of total company headcount and is aligned to the revised Proteus launch timeline. Source
  • Spending managed against revised timeline: Management said it will manage spending against the revised launch timeline while keeping resources needed to advance Proteus toward commercialization. Source
  • Adjusted expenses fund launch work: Management said adjusted operating expenses for 2026 support Proteus development, integration, verification, validation, chemistry and workflow work, and launch preparation. Source

“Based on this work, we believe the non-human proteomics market opportunity for Proteus is substantial”

Jeff Hawkins, president and Chief Executive Officer of Quantum-Si

Cash, runway and liquidity

  • Cash and investments declined: Cash, cash equivalents and marketable securities were $169.9 million at June 30, down from $190.4 million at March 31. Source
  • Runway extended into Q4 2028: Management linked the extended funding period to the updated operating plan, including the workforce reduction and other cost-management actions. Source
  • Cash usage covers Proteus and inventory: Total cash usage is expected to cover Proteus development, selected inventory investments and commercial readiness tied to the Q2 2027 launch timing. Source

Non-human markets and strategy

  • Customer work widens non-human markets: Management said recent customer work covered agricultural, pathogen detection and typing, and viral protein surveillance applications of protein sequencing. Source
  • Addressable market view expanding: Management said ongoing customer work is also widening its view of the addressable markets for the Proteus platform. Source
  • Non-human market may grow further: Management said the non-human market is likely to be larger as its understanding of additional non-human markets develops. Source

Coming up, as management said on 13 August 2026

  • Remaining work before Q2 2027 launch: Management said the Q2 2027 timing allows additional integrated instrument design and testing, verification and validation, and manufacturing and commercial launch preparation. Source

Risks management discussed

  • Financial: Adjusted figures exclude stock-based compensation and restructuring costs, which depend on future events and cannot be reconciled in advance. These could materially affect GAAP operating expenses. Source
  • Demand: Management views 2026 as a transition year, with revenue tied to the move from Platinum to Proteus and to customer purchasing decisions. Source

Earlier plans management reported on

  • Not stated: Management reiterated full-year 2026 revenue, adjusted operating expense and cash usage guidance first issued on March 3, 2026. Source
  • Not stated: The prior release anticipated commercial launch at the end of 2026. The current release moves the anticipated launch to Q2 2027.
  • Not stated: The prior release planned early access sites this summer. The current release does not address that plan.

Other quarters

Summarised with AI from the documents the company filed with the SEC. Every point is checked against the filing before it is shown: management’s own words word for word, figures against the line or table row they come from. A point that fails the check is left out. Source opens the filing at that line.