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Illumina, Inc.: Q4 FY2025 earnings call

What management said about Q4 FY2025, from the documents filed with the SEC on 5 February 2026: press release. Guidance figures: 5 new. The quarter’s numbers.

Key takeaways

  • Q4 revenue rose 5%: Q4 revenue was $1.16 billion, up 5% from Q4 2024, or up 4% on a constant currency basis. Source
  • Q4 EPS on GAAP and non-GAAP: GAAP diluted EPS was $2.16 and non-GAAP diluted EPS was $1.35 for the fourth quarter. Source
  • Q4 ex-China revenue rose 8%: Ex-China revenue was $1.10 billion in Q4, up 8% from Q4 2024 and up 7% on a constant currency basis, compared with 5% total growth. Source
  • Fiscal non-GAAP operating margin rose: Fiscal 2025 non-GAAP operating margin was 23.1%, against 21.3% in 2024. GAAP operating margin was 18.6%, against 34.0% in 2024, a year that included a $456 million legal contingency benefit. Source
  • Q4 free cash flow was $267M: Q4 operating cash flow was $321 million, against $364 million. Capital expenditures were $54 million, and free cash flow was $267 million, against $322 million. Source
  • Fiscal free cash flow was $931M: Fiscal 2025 operating cash flow was $1.1 billion and capital expenditures were $148 million. Depreciation and amortization was $270 million for the year. Source
  • Guidance given on non-GAAP basis: Fiscal 2026 guidance is given on a non-GAAP basis, with constant currency for revenue and growth. Guidance includes the SomaLogic acquisition in reported revenue, margin and EPS. Source

“The Illumina team delivered a strong finish to 2025, marking a return to growth through disciplined execution against our strategy,”

Jacob Thaysen, Chief Executive Officer of Illumina

Guidance

AreaPeriodFigureAgainst last quarter
Total company revenue Sourcefiscal year 2026$4.5 billion to $4.6 billionNew
Reported revenue growth Sourcefiscal year 20264% - 6%, including a 1.5% - 2.0% benefit from SomaLogicNew
Ex-China organic revenue growth Sourcefiscal year 20262% - 4%New
Non-GAAP operating margin Sourcefiscal year 202623.3% - 23.5%, including a negative 100bps impact from SomaLogicNew
Non-GAAP diluted EPS Sourcefiscal year 2026$5.05 - $5.20, including $0.18 in SomaLogic dilutionNew

What changed from last quarter

  • New guidance: Fiscal 2026 guidance appears in this release. The January preliminary release contained no guidance figures. Source
  • New: The company completed the acquisition of SomaLogic, which was pending in the January preliminary release. Source
  • New: The company introduced the Billion Cell Atlas, the first data product of the BioInsight business, for AI-enabled drug discovery. Source
  • New: Eric Green, MD, PhD, was named Chief Medical Officer to advance clinical genomics and expand access to precision medicine. Source
  • New: China's Ministry of Commerce lifted the export ban on Illumina sequencers, while the company's Unreliable Entities List status continued. Source

Fourth quarter and fiscal results

  • Q4 revenue rose 5%: Q4 revenue was $1.16 billion, up 5% from Q4 2024, or up 4% on a constant currency basis. Source
  • Fiscal revenue held flat: Fiscal 2025 revenue was $4.34 billion, flat compared with 2024 on both a reported and constant currency basis. Source
  • Q4 EPS on GAAP and non-GAAP: GAAP diluted EPS was $2.16 and non-GAAP diluted EPS was $1.35 for the fourth quarter. Source
  • Fiscal EPS on GAAP and non-GAAP: Fiscal 2025 GAAP diluted EPS was $5.45 and non-GAAP diluted EPS was $4.84. Source

Ex-China and Core Illumina revenue

  • Q4 ex-China revenue rose 8%: Ex-China revenue was $1.10 billion in Q4, up 8% from Q4 2024 and up 7% on a constant currency basis, compared with 5% total growth. Source
  • Fiscal ex-China revenue rose 2%: Fiscal 2025 ex-China revenue was $4.10 billion, up 2% from 2024 on both reported and constant currency bases. Source
  • Intercompany revenue in 2024 base: Core Illumina 2024 revenue included $15 million of intercompany revenue that was eliminated in consolidation before the GRAIL spin-off. Source

“Momentum built in the second half of the year - especially in clinical markets, where adoption of NGS-based testing is expanding - reinforces our confidence as we enter 2026.”

Jacob Thaysen, Chief Executive Officer of Illumina

Product and service revenue

  • Product revenue rose in both periods: Q4 product revenue was $990 million against $939 million a year earlier. Fiscal 2025 product revenue was $3,709 million against $3,656 million. Source
  • Service revenue declined for the year: Fiscal 2025 service and other revenue was $634 million against $716 million in 2024. Q4 service and other revenue was $169 million against $165 million. Source

Margins and operating costs

  • Q4 gross margin slightly lower: Q4 gross margin was 65.5% GAAP and 67.0% non-GAAP, against 65.9% and 67.4% in Q4 2024. Fiscal non-GAAP gross margin was 68.2%, against 68.6%. Source
  • Fiscal non-GAAP operating margin rose: Fiscal 2025 non-GAAP operating margin was 23.1%, against 21.3% in 2024. GAAP operating margin was 18.6%, against 34.0% in 2024, a year that included a $456 million legal contingency benefit. Source
  • Q4 SG&A and foundation donation: Q4 GAAP SG&A was $310 million against $279 million. Non-GAAP SG&A was $264 million against $271 million, after excluding a $19 million donation to the Illumina Foundation. Source
  • Restructuring and ERP costs excluded: Fiscal 2025 transformational initiatives included $47 million of restructuring severance and $14 million for ERP upgrade implementation, both excluded from non-GAAP results. Source

Cash flow and balance sheet

  • Q4 free cash flow was $267M: Q4 operating cash flow was $321 million, against $364 million. Capital expenditures were $54 million, and free cash flow was $267 million, against $322 million. Source
  • Fiscal free cash flow was $931M: Fiscal 2025 operating cash flow was $1.1 billion and capital expenditures were $148 million. Depreciation and amortization was $270 million for the year. Source
  • Cash position at year end: The company held $1.63 billion in cash, cash equivalents and short-term investments at quarter end. Source
  • Financing outflows rose in 2025: Net cash used in financing activities was $744 million for fiscal 2025, against $570 million in 2024. The release does not break down the financing activities. Source

Acquisition costs and preliminary revisions

  • Acquired intangibles and SomaLogic costs: Fiscal 2025 included $66 million of intangible amortization in cost of revenue and $33 million of acquisition-related legal and other costs, mainly for SomaLogic, excluded from non-GAAP results. Source
  • Q4 EPS final above January preliminary: The January preliminary release gave Q4 non-GAAP diluted EPS of $1.27 to $1.30. The final figure is $1.35. Preliminary revenue was about $1.155 billion; reported revenue is $1.16 billion.
  • January figures subject to audit: The January figures were preliminary and subject to audit. Final fiscal 2025 non-GAAP diluted EPS was $4.84, against a preliminary range of $4.76 to $4.79.

Tax and other income

  • Q4 GAAP tax rate fell to 11.6%: The Q4 GAAP tax rate was 11.6%, against 37.9% a year earlier. The non-GAAP tax rate was 19.5%, against 23.7%. Source
  • Strategic investment gain in other income: Q4 GAAP other income, net was $176 million, including a $192 million strategic investment gain that non-GAAP results exclude. Source

Fiscal 2026 guidance basis

  • Guidance given on non-GAAP basis: Fiscal 2026 guidance is given on a non-GAAP basis, with constant currency for revenue and growth. Guidance includes the SomaLogic acquisition in reported revenue, margin and EPS. Source
  • GAAP reconciliation not provided: The company said it cannot reconcile forward non-GAAP guidance to GAAP figures, because it cannot predict certain items with reasonable certainty. Source

Risks management discussed

  • Regulatory: The company remains on China's Unreliable Entities List, which requires approvals for instrument purchases in China. Source
  • Financial: A one-time $42 million valuation allowance was recorded in Q3 2025 against deferred tax assets for certain US foreign tax credits. Source

Earlier plans management reported on

  • Not stated: The January preliminary release said full fourth quarter and fiscal 2025 results would be reported after market close on February 5, 2026.

Other quarters

Summarised with AI from the documents the company filed with the SEC. Every point is checked against the filing before it is shown: management’s own words word for word, figures against the line or table row they come from. A point that fails the check is left out. Source opens the filing at that line.